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Chelex-100

Definition

Styrene-divinylbenzene ion-exchange resin with iminodiacetate chelating groups. Used at 5% w/v in forensic DNA extraction to bind divalent metal cations during boiling lysis. Product is single-stranded DNA in aqueous supernatant.

Composition
Styrene-divinylbenzene resin, iminodiacetate groups
Working concentration
5% w/v
Mechanism
Binds divalent metal cations during boiling lysis
Yield
Single-stranded DNA in aqueous supernatant

Common questions

Why does Chelex extraction only give single-stranded DNA?+

The boiling step needed to lyse cells and inactivate nucleases also denatures the double helix, and unlike organic or column extraction there is no subsequent step that reanneals or purifies double-stranded product, so the recovered DNA stays single-stranded.

What is Chelex-100 protecting the DNA from during boiling?+

It chelates the divalent metal ions, mainly magnesium, that nucleases require as cofactors, so binding them up starves any residual DNase activity even as the sample is heated to lyse the cells.

Related terms

Chaotropic Salt
Guanidinium thiocyanate or hydrochloride at 4-6 M concentration. Disrupts the hydration shell of DNA and causes it to bind electrostatically to silica...
Inhibition Index
A quantitative measure of PCR inhibitor burden in a DNA extract, derived from the Ct shift of an internal positive control (IPC)...
Maxwell RSC 48
Promega cartridge-based magnetic-bead extraction instrument. Each cartridge is pre-loaded with all reagents; closed-format processing eliminates cross-contamination. Used at FBI Laboratory and AFMES.
Phenol-Chloroform-Isoamyl Alcohol (PCI) Extraction
Organic extraction method using differential solubility to partition DNA into an aqueous phase while proteins and lipids accumulate at the organic-aqueous interface...
QIAcube Connect
QIAGEN robotic workstation that automates spin-column extraction protocols (QIAamp DNA Investigator). Processes 12 samples per 60-minute run; used in UK, US and...

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