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Plant Growth on Remains as PMI Indicator

Algae, mosses, lichens, and higher plants colonise surface-deposited human remains in a measurable sequence, providing post-mortem interval estimates that complement entomological and chemical methods.

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Plant colonisation of surface-deposited human remains follows a predictable succession that can be used to estimate post-mortem interval (PMI). Algal crusts develop on exposed bone within weeks if moisture is present; mosses establish within months to two years; crustose lichens grow slowly enough that their thallus diameter, measured against site-calibrated growth rates, can bracket PMI ranges of years to decades. Because these botanical clocks operate independently of insect succession and soft-tissue condition, they extend PMI estimation well beyond the range of entomological and pathological methods.

Surface-deposited human remains are colonised by plants in a sequence that records elapsed time. Within days of exposure in a humid environment, microscopic algae form a thin photosynthetic film on bone and clothing. Within weeks to months, moss spores germinate in sheltered crevices. Over years, crustose lichens establish and grow at measurable rates, while higher plants root into and around the remains.

This plant colonisation is not random. It follows a predictable succession shaped by substrate availability, climate, and the nutritional changes created by decomposition beneath. Each phase of colonisation has a measurable rate, and those rates can be calibrated against local climate data to generate post-mortem interval estimates that are independent of insect succession, soil chemistry, or soft-tissue condition.

This topic covers algal and moss colonisation as early PMI indicators, lichenometry as the primary tool for longer PMI ranges, seed germination patterns and their interpretation, and the practical challenge of combining these botanical signals with entomological and pathological evidence to bracket the time since death as tightly as the evidence allows.

By the end of this topic you will be able to:

  • Describe the colonisation sequence from algal crust through moss and lichen to higher plants, and assign each stage an approximate minimum elapsed time under temperate conditions.
  • Apply lichenometric principles to estimate minimum colonisation age from crustose lichen thallus diameter, given a site-calibrated radial growth rate.
  • Explain why botanical PMI estimates are expressed as minimums and identify conditions (covering, freezing, drought, initial burial) that can delay colonisation.
  • Integrate botanical PMI evidence with entomological and pathological evidence to narrow an estimated time-since-death window.
  • Describe correct field sampling and documentation procedures for algal, moss, and lichen evidence on skeletal remains, including calibration from nearby structures of known age.
Key terms
Lichenometry
The use of lichen thallus diameter to estimate the minimum age of a surface. Based on the known or measured radial growth rate of a species at a specific location, the current diameter implies a minimum colonisation age.
Epilithic / epixylous colonisation
Growth of organisms on rock or stone surfaces (epilithic) or on dead wood (epixylous). In forensic contexts, colonisation of bone surfaces by microorganisms, algae, mosses, and lichens falls into these categories.
Biological soil crust (biocrust)
A community of cyanobacteria, algae, mosses, fungi, and lichens that colonises bare soil surfaces and forms a thin coherent mat. Relevant to forensic botany because biocrusts colonise exposed soil and sometimes bone surfaces on or near surface remains.
Crustose lichen
A lichen growth form in which the thallus grows flat against and into the substrate (bone, stone, wood) and cannot be removed without damage to the substrate. Crustose species are most useful for lichenometric dating because their growth is slow, regular, and easily measured.
Succession
The sequential change in community composition on a surface or in a habitat over time, driven by the modification of conditions by early colonisers that enables later species to establish. On remains, succession runs from algal crusts through mosses to lichens and finally higher plants.
Thallus
The body of a lichen, consisting of fungal hyphae housing algal or cyanobacterial cells. The thallus diameter or area is the measurement used in lichenometry.

Algal colonisation as an early PMI indicator

Green algae and cyanobacteria are cosmopolitan organisms with airborne propagules that reach virtually any exposed damp surface within days. On newly exposed bone, particularly in humid environments or following rainfall, a thin photosynthetic film develops as algal cells adhere to the calcium carbonate and organic matrix of the cortical bone surface. This film is visible to the naked eye as a pale green or grey-green discolouration that is quite different from the yellowing of dry oxidised bone.

The diagnostic value of algal colonisation is primarily temporal in the short term. Absence of algal film on bone that has been exposed in a humid environment suggests very recent deposition, potentially within the previous few weeks. Presence of an established, dense crust suggests at minimum several weeks to months of exposure. The limitation is sensitivity to microclimate: a bone in deep shade retains moisture and algalises rapidly, while one in direct sun on a dry, south-facing slope may remain uncolonised for months.

Cyanobacterial communities (blue-green algae) are particularly useful because they include nitrogen-fixing species that begin to modify the substrate surface chemistry. Their presence, along with the identifiable genera (Pleurocapsales, Oscillatoriales) recorded by microscopy, can sometimes be compared against regional records of algal communities to confirm the habitat type of the deposition site, contributing to scene reconstruction beyond pure PMI estimation.

Moss colonisation and the medium-term PMI window

Mosses (division Bryophyta) are among the first macroscopic plants to colonise disturbed or bare surfaces, particularly in humid temperate environments. Their spores are widely dispersed by wind, and germination can occur on a range of substrates including bare soil, decaying wood, stone, and bone. On skeletal remains, moss colonies typically establish within a few months to two years of initial surface exposure, depending on climate and shade.

The forensic value of mosses comes from two sources. First, presence of established moss colonies with rhizoid penetration into the bone surface indicates a minimum exposure period of several months to over a year: moss takes time to germinate, establish a protonema (the filamentous juvenile stage), and develop a leafy gametophyte visible to the eye. Second, certain mosses have measurable annual growth increments, and in some cases the number of shoot segments corresponding to growing seasons can be counted, giving a rough minimum colonisation age.

Fresh bone (day 0)Algal film(weeks-months)Moss colonies(months-years)Lichens(years+)Progressive colonisation: each stage is a minimum-time marker
Colonisation sequence on surface bone: algae to moss to lichen over time.

Collecting and identifying mosses on remains requires care. Species identification is done under dissecting and compound microscopy using leaf morphology, cell shape, and reproductive structure. The botanical literature provides growth-rate data for common temperate species (for example, Funaria hygrometrica, a pioneer moss frequently found on disturbed damp ground, can establish a visible colony within two to three months under favourable conditions). Comparing the growth state of the moss on the remains against local background growth rates provides a calibrated estimate.

Lichenometry: measuring thallus diameter as a clock

Lichenometry was developed by the Icelandic geographer Sigurdur Thorarinsson in the 1950s for dating glacial moraines and archaeological structures, using the maximum diameter of crustose lichen thalli on rock surfaces as a proxy for surface age. The principle is simple: a lichen that grows at a known radial rate will reach a diameter proportional to the time since the surface was first exposed. Applied to bone, the same logic holds: the largest lichen thallus on a bone surface has been growing since at least the time of first colonisation.

In forensic contexts the most commonly used species belong to genera with well-documented growth rates: Rhizocarpon geographicum (map lichen, typically 0.3-1 mm per year), Xanthoria parietina (orange maritime lichen, faster at 1-3 mm per year in maritime climates), and Lecanora spp. (variable, but widely studied). Site-specific growth rates must be calibrated from surfaces of known age in the same environment, such as headstones or dated masonry in the vicinity.

Lichen genusTypical growth rate (radial, mm/year)Substrate preferencePMI range suited to
Rhizocarpon geographicum0.3-1.0Siliceous rock surfacesDecades to centuries
Xanthoria parietina1.0-3.0Calcareous stone, boneYears to decades
Lecanora campestris0.5-2.0Calcareous stone, concreteYears to decades
Physcia adscendens0.5-1.5Bark, calcareous stoneYears to decades
Parmelia sulcata1.0-4.0Bark, rockYears to decades, faster warm climates

Measuring thallus diameter is done under a hand lens or dissecting microscope with a calibrated eyepiece graticule or a digital calliper applied gently to the thallus. The largest thallus on a given bone is the one that colonised first and thus gives the maximum minimum age. Multiple measurements and photographs are taken and retained as exhibits.

Seed germination and higher plant establishment on surface remains

Seeds carried by wind, water, or animals land on and around surface-deposited remains continuously. If conditions allow germination, the resulting plants incorporate information about minimum exposure time into their age and growth state. Annual plants that complete a full life cycle in one year are the most straightforward: a first-year annual growing from a seed embedded in clothing or soil around the remains means the remains have been present for at least the current growing season.

Perennial plants tell a longer story. A clump of grass with a root-base showing three distinct annual growing seasons means the grass has been established for at least three years, and the surface beneath it has been stable for at least that long. For tussock-forming species such as Deschampsia caespitosa or Molinia caerulea, tussock height and stem-count have been used as rough proxies for establishment age in temperate bog habitats.

  • Annuals germinating in season: Constrain the deposit to at least the current growing season. If the annual has set seed and died, at least one full growing cycle has passed.
  • Biennial stem base: A biennial with a rosette in its first year and a flowering stem in its second year indicates at least two growing seasons of surface stability.
  • Perennial crown increments: Some perennials add a measurable increment to their crown each year. Counting these gives a minimum establishment age for the plant and a minimum surface-stability period.
  • Root development into soil or bone: Higher-plant roots growing through or around bone integrate with the root-dating methods discussed in a companion topic, providing corroborating PMI evidence.

Integrating botanical PMI with entomological and pathological evidence

Botanical PMI estimation is most powerful when it corroborates or refines estimates from other disciplines. Forensic entomology covers the early PMI window well, typically from days to several months, using insect succession and development rates. Pathological evidence (decomposition stage, adipocere formation, mummification) provides a broad qualitative bracket. Botanical colonisation fills the gap from weeks onward and extends through years to decades in ways that insect and soft-tissue methods cannot.

Entomology (days-months)Pathology/taphonomy (days-years)Botanical (weeks-decades)Extends farthestIncreasing post-mortem interval (left to right)
PMI estimation coverage: entomology, pathology, and botanical methods by time range.

A well-constructed PMI report for a surface deposit of skeletal remains might state: entomological evidence indicates a minimum PMI of 18 months based on insect void patterns and absence of recent colonisers; algal and moss colonisation on the cranium is consistent with at least 18-24 months of surface exposure; the largest lichen thallus on the parietal bone measures 8 mm in diameter and, using a calibrated growth rate of 1.2 mm per year from local headstone comparison, indicates a minimum colonisation age of approximately 6 years, suggesting the remains may have been present longer than the insect evidence alone implies.

Convergent reasoning, in which multiple independent methods produce overlapping ranges that narrow around a plausible window, is the standard for PMI evidence in serious casework. Where the botanical estimate extends beyond the insect estimate, it raises a hypothesis worth testing: was the body moved? Was it initially covered and only recently exposed? These are investigative questions that the botanical evidence cannot answer alone but can legitimately raise.

Sampling, documentation, and expert reporting

Botanical PMI evidence on remains requires careful sampling to preserve the organisms for laboratory examination without destroying the contact-zone context. Algal crusts are sampled by sterile swab or by gently lifting a section of surface film with a scalpel onto a microscope slide. Moss patches are photographed in situ with a scale bar, then removed with their substrate if possible, or sampled with a small fragment for identification. Lichen thalli are measured and photographed in place; if removal is necessary for species identification, the point of measurement is GPS-tagged and photographed.

  1. Document all visible plant growth on and immediately around remains before any disturbance, with macro photographs and a scale bar at each location.
  2. Collect calibration samples from nearby surfaces of known age (dated headstones, concrete structures with known pour date) for lichen growth rate estimation.
  3. Record microclimate data: shade/sun aspect, estimated moisture availability, proximity to water, altitude. These contextualise growth-rate adjustments.
  4. In the laboratory, identify organisms to genus and species level using appropriate keys. State the identification confidence and the reference used.
  5. In the report, frame all PMI estimates as minimums derived from observed growth and calibrated rates, state the uncertainty range, and note any conditions that might have delayed colonisation.
Check your understanding
Question 1 of 4· 0 answered

A lichen thallus on a cranial bone measures 18 mm. The local calibrated growth rate is 1.5 mm per year. What does this give the forensic botanist?

Key Takeaways

  • Plant colonisation of surface human remains follows a predictable succession: algal crusts within weeks, moss colonies within months to years, lichens from years onward, each phase providing a minimum elapsed time estimate.
  • Lichenometry is the primary botanical method for long PMI ranges, converting crustose lichen thallus diameter into a minimum colonisation age using site-calibrated growth rates from dated local structures.
  • All botanical PMI estimates are minimums: colonisation can be delayed by covering, freezing, drought, or initial burial, so the method reports the minimum time the surface has been accessible, not necessarily the time since death.
  • Site-specific growth-rate calibration from nearby structures of known age is essential for court-credible lichenometry; published regional average rates alone are insufficient.
  • Botanical PMI evidence is strongest when combined with entomological, pathological, and root-growth evidence, with each method covering a distinct part of the post-mortem timeline.
Can lichens accurately date human remains?
Lichenometry is a minimum-age method. A lichen thallus growing on bone or stone has been there at least as long as it took to reach its current diameter at the known or estimated growth rate for that species in that climate. Precision is limited: lichen growth rates vary with exposure, humidity, and pollution, and the method typically gives a range of years rather than a specific date. It is most useful for remains that have been exposed for several years or decades.
What is the difference between using algae and using lichens for PMI estimation?
Algal crusts colonise exposed damp surfaces within weeks to months of exposure, making them useful indicators for recent PMI. Lichens are far slower colonisers, typically taking years to establish a measurable thallus, so they indicate much longer PMI ranges. Mosses fall in between, colonising within months to a few years depending on moisture and substrate. Each organism covers a different part of the PMI timeline.
How does seed germination help estimate PMI?
Seeds that land on or near surface-deposited remains can germinate if conditions allow. The height and root development of a seedling is roughly correlated with time since germination. For annual plants this can constrain the deposit to within one growing season if the plant is still in its first year. For perennial plants the number of stem base growth increments can indicate how many growing seasons have passed since establishment.
Why are surface remains more useful than buried remains for botanical PMI?
Surface remains are directly accessible to plant propagules carried by wind and rain, so colonisation begins immediately on exposure. Buried remains are isolated from propagule rain and only receive roots, which give burial-interval information rather than post-mortem interval. Surface deposits also preserve the sequence of colonisation events more completely, allowing a successional timeline to be read from the remains themselves.
Can botanical PMI evidence be challenged in court?
Yes. Defence challenges typically focus on the variability of growth rates across microclimates, the difficulty of establishing site-specific growth-rate calibrations, and the possibility that colonisation was delayed by early adverse conditions. The botanist should frame conclusions as minimum estimates with stated assumptions and should include comparison measurements from the surrounding environment to calibrate local rates. Peer-reviewed growth-rate literature is the basis for the opinion.

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