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The Core Lab Sciences: Biology, Chemistry, Physics

The forensic laboratory sciences examine physical material recovered from scenes and people. This topic covers forensic biology and DNA, forensic chemistry, and forensic physics and trace examination, explaining what each division does and how.

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The forensic laboratory is divided into specialist sections, each handling a distinct class of physical evidence. Three sections form the scientific core of most national labs: forensic biology, which moves from body-fluid detection through serology to DNA profiling; forensic chemistry, which identifies and quantifies drugs, explosives residues, and fire-debris accelerants using tiered instrumental analysis; and forensic physics and trace examination, which compares physical and optical properties of glass, paint, fibres, and marks to assess common origin. Each section applies validated analytical methods and is required to report findings with stated uncertainty, because a result divorced from its limitations is not a forensic result.

What happens after a scene examiner seals a swab into a tube depends on which bench it lands on. The forensic laboratory is a collection of specialist sections, each configured for a different class of material and a different analytical question. Three of those sections form the scientific core of most forensic labs: biology, chemistry, and physics and trace examination.

Forensic biology began with the naked-eye identification of blood and has since developed into DNA profiling capable of generating a profile from a small number of skin cells deposited by touch. Forensic chemistry started with spot tests for drugs and poisons and now runs mass spectrometers and ion chromatographs that can identify molecules at nanogram concentrations. Forensic physics and trace examination apply optical measurement and comparison microscopy to material fragments, including glass, fibres, paint, and soil, to assess whether a scene sample and a reference sample share a common origin.

This topic covers each of the three divisions in turn: the evidence types they handle, the analytical techniques they use, how findings are expressed, and where the limits of each discipline sit. Those limits matter as much as the capabilities, because a report that overstates what the science can prove is an unreliable document.

By the end of this topic you will be able to:

  • Describe the three-stage workflow in forensic biology (detection, characterisation, STR profiling) and explain why each stage gates the next.
  • Explain the tiered protocol in forensic drug analysis, distinguishing presumptive colour tests from confirmatory GC-MS identification and quantification.
  • Identify the primary analytical techniques for each major trace evidence type (glass, paint, fibres, soil, tool marks) and state the key discriminating property each technique exploits.
  • Interpret what a positive GSR result does and does not establish, including the persistence limits and the significance of lead-free primer formulations.
  • Distinguish between class-level and individual-level evidence and explain the reporting obligation to express findings with their uncertainty and the limits of the underlying method.
Key terms
Serology
The examination and identification of body fluids at crime scenes, typically blood, semen, saliva, and urine, using chemical tests and immunological methods before DNA profiling is attempted.
STR profiling
Short tandem repeat profiling, the dominant DNA typing method in forensic laboratories. It measures the number of repeated sequences at multiple specific locations (loci) in the genome, generating a numerical profile that can be compared against reference samples or national databases.
GC-MS
Gas chromatography-mass spectrometry: a two-stage technique that separates the components of a mixture (GC) and then identifies each component by its molecular fragmentation pattern (MS). The standard confirmatory method for forensic drug and fire-debris analysis.
Refractive index
A physical property of glass (and other transparent materials) that describes how much light bends when passing through it. Forensic glass comparison measures refractive index to discriminate between glass from different sources.
Fire debris analysis
The laboratory examination of material collected from a suspected arson scene to detect and identify accelerants (hydrocarbons from petrol, lighter fluid, or other ignitable liquids) that distinguish an intentional fire from an accidental one.
Touch DNA
DNA recovered from skin cells deposited through handling or contact, without visible biological material. Highly sensitive but prone to secondary and tertiary transfer, making interpretation of who deposited the material a central challenge.

Forensic biology: from serology to DNA

Forensic biology covers biological material deposited at scenes or on individuals: blood, semen, saliva, sweat, urine, vaginal secretions, hair, fingernails, and tissue. The workflow starts with detection (is biological material present?), moves through characterisation (which fluid is it?), and ends with profiling (whose DNA is in it?). Each step uses different methods, and not every sample makes it to the profiling stage.

Serology provides the presumptive and confirmatory tests for fluid type. Blood is detected at scene with luminol or the Kastle-Meyer test (a phenolphthalein-based colour screen), the traditional presumptive test for blood. Semen is identified by acid phosphatase activity or the presence of prostate-specific antigen (PSA). Saliva is detected by salivary amylase. These tests tell the analyst what biological material is worth submitting for DNA.

DetectionCharacterisationDNA ExtractionSTR Profileluminol, KM testPSA, amylasedifferential lysisCE, capillary
Forensic biology workflow from scene to DNA profile.

STR profiling is the current standard for DNA identification. It measures the number of repeated short sequences at each of a defined set of loci. The CODIS system in the United States uses 20 core STR loci; the UK NDNAD uses 16. The probability of two unrelated individuals sharing the same profile at all loci is vanishingly small, typically stated as one in several billion or more for full profiles. Partial profiles (fewer loci amplified, common with degraded samples) carry a weaker statistical weight and should be reported accordingly.

Forensic chemistry: drugs, explosives, and fire

Forensic chemistry handles the largest volume of casework in most national laboratory systems. Drug seizure analysis alone accounts for the majority of submissions to many labs. The chemist's fundamental task is the same in every case: identify the chemical composition of an unknown substance, and compare samples to determine whether they share a common source or origin.

Drug analysis follows a tiered protocol. A colour presumptive test (Scott for cocaine, Marquis for opiates and amphetamines, Duquenois-Levine for cannabis) gives an initial screen, not a confirmed identification. Confirmation requires an instrumental technique, with GC-MS as the accepted gold standard. The result must identify the specific compound (e.g., MDMA not just 'amphetamine-type substance') and, in some jurisdictions, quantify the purity, because sentencing in many legal systems scales with quantity and concentration.

  • Controlled drugs: colour tests screen, GC-MS or HPLC-MS confirms identity and purity.
  • Explosives residues: ion chromatography (IC) and GC-MS detect characteristic ions (nitrates, peroxides, TATP, PETN) from post-blast debris or suspected devices.
  • Fire debris: headspace extraction followed by GC-MS screens for C6-C12 hydrocarbons indicating petroleum-based accelerants.
  • Ink and printing: HPTLC and mass spectrometry compare ink formulations in questioned-document support work.
  • Toxicological chemistry: when forensic toxicology is integrated into the chemistry section, immunoassay screens blood or urine; GC-MS or LC-MS-MS confirms the specific compound and concentration.

Explosives work carries additional complexity because the blast destroys most of the original material. Post-blast analysis targets residues on surfaces near the seat of the explosion, swabs from a suspect's hands, and fragments from the device itself. Inorganic components (perchlorates, nitrates) survive heat better than organic compounds, so IC plays a larger role in post-blast work than in intact-device analysis.

Forensic physics and trace examination

Trace examination works with fragments so small they are often invisible at the scene: glass shards, paint flakes, single fibres, soil particles, tool marks, tyre marks, and shoe prints. The physical scientist's task is comparison: does this sample from a suspect share a common origin with this sample from the scene? The question is about the physical and optical properties of the material, not its chemistry at the molecular level (though chemical methods are frequently combined).

Trace typePrimary comparison techniqueKey discriminating property
GlassGRIM3 (temperature immersion method) + SEM-EDXRefractive index + elemental profile
PaintPyrolysis GC-MS + optical microscopyLayer sequence + binder chemistry
FibresPolarised light microscopy + microspectrophotometryFibre type, colour, optical properties
SoilParticle size analysis + pollen examinationMineralogy, colour, biological components
Tool marksComparison microscope + 3D surface scanningClass and individual striations on surface

Glass comparison is a well-validated area of trace evidence. When a window is broken, fragments scatter backward toward the person who broke it as well as forward. Those fragments can be collected from clothing or hair. The refractive index is measured precisely using the glass refractive index measurement (GRIM3) technique, and the elemental profile is determined by SEM-EDX or LA-ICP-MS. A match between scene glass and suspect clothing is expressed statistically using population databases of glass types.

Fibre evidence requires both discrimination (is this fibre type consistent with the source garment?) and transfer context (how and when did it move?). A fibre from a victim's jumper on a suspect's car seat is meaningful only if its persistence is considered: the same fibre would be meaningless if the two people had any innocent prior contact. This is why trace evidence almost always needs to be assessed alongside a statement from both suspect and victim about their contact history.

Gunshot residue: where chemistry meets physics

Gunshot residue (GSR) is the microscopic particulate cloud ejected from a firearm's barrel, cylinder gap, and breech when a round is fired. It lands on the hands, face, and clothing of the shooter and, to a lesser extent, on bystanders and surfaces nearby. The primary analytical method is scanning electron microscopy with energy-dispersive X-ray spectroscopy (SEM-EDX), which identifies the characteristic three-element particles of lead, barium, and antimony from conventional primer formulations.

The interpretation of a positive GSR result is more complex than it first appears. The three-element particles are highly characteristic of a firearms discharge, but lead-barium-antimony particles from non-firearms sources (some industrial processes, certain fireworks, brake dust) have been documented. Lead-free 'green' primers produce different elemental signatures, requiring updated analytical criteria. And persistence is short: active hand-washing removes most particles within an hour or two, and normal activity erodes the count over the same timeframe.

Shooter (high density)Near bystander /surfaceWeapon itselfsecondary deposition within ~1 mhighest deposit on barrel/cylinder
GSR particle distribution after discharge.

Reporting and the limits of comparison evidence

Across biology, chemistry, and trace examination, the forensic scientist's job ends not when the instrument produces a number but when that number is correctly communicated to the investigator and, eventually, to the court. The UK Forensic Science Regulator and the European Network of Forensic Science Institutes (ENFSI) have both published guidance requiring scientists to report findings within a likelihood ratio (LR) framework where possible, stating how much more probable the evidence is if the prosecution hypothesis is true than if the defence hypothesis is true.

For DNA, this is routine: a full STR match is reported as a likelihood ratio in the billions. For trace evidence, the calculation is harder because the relevant population databases (how many vehicles have this paint sequence? how many blue polyester jumpers of this dye lot?) are often incomplete. In those cases, scientists express their findings qualitatively, using terms calibrated to their laboratory's standard scale, from 'weak support' to 'very strong support' for a common origin. The scale must be defined in the report, not assumed.

  • A match does not equal proof of contact. It raises the probability that two samples share an origin. The investigator and the court assign that probability its evidential weight.
  • A non-match does not equal proof of no contact. Transfer may not have occurred, or the evidence may not have persisted to collection.
  • Validated methods, accredited labs, and independently audited interpretation criteria are the quality markers a court should expect.
Check your understanding
Question 1 of 4· 0 answered

What is the purpose of a colour presumptive test in drug analysis, and why is it not used as the final identification?

Key Takeaways

  • Forensic biology moves from detection (is biological material present?) through characterisation (which fluid?) to STR DNA profiling (whose?), with each stage gating the next.
  • Forensic chemistry identifies and quantifies substances using a tiered protocol: a presumptive screen followed by GC-MS or HPLC-MS confirmation. The same logic applies to drugs, explosives residues, and fire-debris accelerants.
  • Trace examination compares physical properties (refractive index, elemental profile, optical properties, layer sequence) of glass, paint, fibres, soil, and marks to assess whether two samples share a common origin.
  • Most trace evidence is class-level, not individual. Reports should state which kind of claim the evidence supports.
  • All three sections are bound by the same reporting obligation: a result must be communicated with its uncertainty, its method validation, and its limitations clearly stated. The scientist testifies to what was found; the court assigns its weight.
What is forensic biology?
Forensic biology is the laboratory examination of biological material found at crime scenes or on individuals. It covers serology (identifying body fluids), DNA profiling from those fluids and touch deposits, hair microscopy, and botanical evidence.
What does a forensic chemist analyse?
Forensic chemists analyse controlled drugs, explosives residues, fire debris, paint, glass, soil, ink, and other chemical substances. Their core task is identification (what is this?) and comparison (do these two samples share a common source?).
What is the difference between forensic biology and forensic toxicology?
Forensic biology examines biological material for identification and linkage. Forensic toxicology examines what drugs or poisons are in body fluids or tissues and at what concentration, primarily to determine impairment or cause of death. The questions differ even when the sample types overlap.
How does forensic physics differ from forensic chemistry?
Forensic physics applies physical measurement and comparison to trace fragments: glass, paint, fibres, soil, and marks. Forensic chemistry focuses more on molecular composition, particularly for unknowns such as drugs or explosives. In practice the two overlap substantially in many labs.
What is a forensic database and why does it matter?
A forensic database stores reference profiles for comparison: DNA from scenes and offenders, fingerprint records, shoe-mark databases, paint databases for vehicles, and glass databases. Matching a crime-scene sample against a database can identify a suspect or source without any prior investigative lead.

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